Biologicalization is considered one of the most important transformation processes in industry alongside digitalization. This work presents a qualification concept within the Stuttgart Biointelligent Manufacturing Framework (BioMEFUS), which is intended to provide skills and experiences at the intersections between manufacturing and process engineering, computer science and life science. Life cycle management, production methods and engineering of components towards the development and implementation of biointelligent systems are considered as the major engineering platforms of the framework. The qualification concept is developed for early stage researchers (ESRs) at the doctorate stage. It provides a mapping of individual research projects in the field of biointelligent production systems and contains subject-related and methodological building blocks for the formation of future experts and decision-makers in the course of biological transformation.